--- title: "Using PlatformConfig" output: github_document vignette: | %\VignetteIndexEntry{Using PlatformConfig} %\VignetteEngine{knitr::rmarkdown} %\VignetteEncoding{UTF-8} --- ## Advanced schema configuration Default schema-level TileDB parameters are set to be useful for most users. If you have particular needs or use-cases, though, you can use the `PlatformConfig` options to override default schema parameters. ``` platform_config <- PlatformConfig$new() platform_config$set('tiledb', 'create', 'dataframe_dim_zstd_level', 8) platform_config$set('tiledb', 'create', 'sparse_nd_array_dim_zstd_level', 9) platform_config$set('tiledb', 'create', 'tile_order', 'ROW_MAJOR') platform_config$set('tiledb', 'create', 'cell_order', 'ROW_MAJOR') platform_config$set('tiledb', 'create', 'dims', list( soma_dim_0 = list(filters = list(list(name="ZSTD", COMPRESSION_LEVEL=9)), tile=100000), soma_dim_1 = list(filters = list(list(name="ZSTD", COMPRESSION_LEVEL=9)), tile=100000), )) platform_config$set('tiledb', 'create', 'attrs', list( soma_data_a = list(filters = list("RLE")) )) tdco <- TileDBCreateOptions$new(platform_config) ``` This can then be passed to `SOMADataFrameCreate`, `SOMASparseNDArrayCreate`, et al. Coming soon: advice on how to connect these with `from_seurat`.